methylMnM
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see methylMnM.
detect different methylation level (DMR)
Bioconductor version: 3.9
To give the exactly p-value and q-value of MeDIP-seq and MRE-seq data for different samples comparation.
Author: Yan Zhou, Bo Zhang, Nan Lin, BaoXue Zhang and Ting Wang
Maintainer: Yan Zhou<zhouy1016 at 163.com>
Citation (from within R, enter
citation("methylMnM")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("methylMnM")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("methylMnM")| methylMnM | R Script | |
| Reference Manual |
Details
| biocViews | DNAMethylation, Sequencing, Software |
| Version | 1.22.0 |
| In Bioconductor since | BioC 2.13 (R-3.0) (10.5 years) |
| License | GPL-3 |
| Depends | R (>= 2.12.1), edgeR, statmod |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | SIMD |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | methylMnM_1.22.0.tar.gz |
| Windows Binary | methylMnM_1.22.0.zip |
| Mac OS X 10.11 (El Capitan) | methylMnM_1.22.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/methylMnM |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/methylMnM |
| Bioc Package Browser | https://code.bioconductor.org/browse/methylMnM/ |
| Package Short Url | https://bioconductor.org/packages/methylMnM/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |