metabomxtr
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see metabomxtr.
A package to run mixture models for truncated metabolomics data with normal or lognormal distributions
Bioconductor version: 3.9
The functions in this package return optimized parameter estimates and log likelihoods for mixture models of truncated data with normal or lognormal distributions.
Author: Michael Nodzenski, Anna Reisetter, Denise Scholtens
Maintainer: Michael Nodzenski <michael.nodzenski at northwestern.edu>
citation("metabomxtr")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("metabomxtr")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("metabomxtr")| metabomxtr | R Script | |
| mixnorm | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | ImmunoOncology, MassSpectrometry, Metabolomics, Software |
| Version | 1.18.0 |
| In Bioconductor since | BioC 3.0 (R-3.1) (9.5 years) |
| License | GPL-2 |
| Depends | methods, Biobase |
| Imports | optimx, Formula, plyr, multtest, BiocParallel, ggplot2 |
| System Requirements | |
| URL |
See More
| Suggests | xtable, reshape2 |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | metabomxtr_1.18.0.tar.gz |
| Windows Binary | metabomxtr_1.18.0.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | metabomxtr_1.18.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/metabomxtr |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/metabomxtr |
| Bioc Package Browser | https://code.bioconductor.org/browse/metabomxtr/ |
| Package Short Url | https://bioconductor.org/packages/metabomxtr/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |