flowQB
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see flowQBData.
Automated Quadratic Characterization of Flow Cytometer Instrument Sensitivity: Q, B and CV instrinsic calculations
Bioconductor version: 3.9
flowQB is a fully automated R Bioconductor package to calculate automatically the detector efficiency (Q), optical background (B) and intrinsic CV of the beads.
Author: Josef Spidlen, Faysal El Khettabi, Wayne Moore, David Parks, Ryan Brinkman
Maintainer: Josef Spidlen <jspidlen at gmail.com>
citation("flowQB")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("flowQB")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowQB")| flowQB package | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | FlowCytometry, ImmunoOncology, MultiChannel, OneChannel, PeakDetection, QualityControl, Regression, Software |
| Version | 2.11.1 |
| In Bioconductor since | BioC 2.11 (R-2.15) (11.5 years) |
| License | Artistic-2.0 |
| Depends | |
| Imports | methods, flowCore(>= 1.32.0), stats, extremevalues |
| System Requirements | |
| URL |
See More
| Suggests | flowQBData, FlowRepositoryR, xlsx, RUnit, BiocGenerics |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | flowQBData |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | flowQB_2.11.1.tar.gz |
| Windows Binary | flowQB_2.11.1.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | flowQB_2.11.1.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/flowQB |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/flowQB |
| Bioc Package Browser | https://code.bioconductor.org/browse/flowQB/ |
| Package Short Url | https://bioconductor.org/packages/flowQB/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |