flowMerge
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see flowMerge.
Cluster Merging for Flow Cytometry Data
Bioconductor version: 3.9
Merging of mixture components for model-based automated gating of flow cytometry data using the flowClust framework. Note: users should have a working copy of flowClust 2.0 installed.
Author: Greg Finak <gfinak at fhcrc.org>, Raphael Gottardo <rgottard at fhcrc.org>
Maintainer: Greg Finak <gfinak at fhcrc.org>
citation("flowMerge")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("flowMerge")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowMerge")| Merging Mixture Components for Cell Population Identification in Flow Cytometry Data The flowMerge Package. | HTML | R Script |
| Reference Manual |
Details
| biocViews | Clustering, FlowCytometry, ImmunoOncology, Software |
| Version | 2.32.0 |
| In Bioconductor since | BioC 2.5 (R-2.10) (14.5 years) |
| License | Artistic-2.0 |
| Depends | graph, feature, flowClust, Rgraphviz, foreach, snow |
| Imports | rrcov, flowCore, graphics, methods, stats, utils |
| System Requirements | |
| URL |
See More
| Suggests | knitr, rmarkdown |
| Linking To | |
| Enhances | doMC, multicore |
| Depends On Me | |
| Imports Me | CONFESS, flowType |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | flowMerge_2.32.0.tar.gz |
| Windows Binary | flowMerge_2.32.0.zip |
| Mac OS X 10.11 (El Capitan) | flowMerge_2.32.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/flowMerge |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/flowMerge |
| Bioc Package Browser | https://code.bioconductor.org/browse/flowMerge/ |
| Package Short Url | https://bioconductor.org/packages/flowMerge/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |