dualKS
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see dualKS.
Dual KS Discriminant Analysis and Classification
Bioconductor version: 3.9
This package implements a Kolmogorov Smirnov rank-sum based algorithm for training (i.e. discriminant analysis--identification of genes that discriminate between classes) and classification of gene expression data sets. One of the chief strengths of this approach is that it is amenable to the "multiclass" problem. That is, it can discriminate between more than 2 classes.
Author: Eric J. Kort, Yarong Yang
Maintainer: Eric J. Kort <ericjkort at gmail.com>, Yarong Yang <yarong.yang at ndsu.edu>
citation("dualKS")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("dualKS")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("dualKS")| dualKS.pdf | R Script | |
| Reference Manual |
Details
| biocViews | Classification, Microarray, Software |
| Version | 1.44.0 |
| In Bioconductor since | BioC 2.3 (R-2.8) (15.5 years) |
| License | LGPL (>= 2.0) |
| Depends | R (>= 2.6.0), Biobase(>= 1.15.0), affy, methods |
| Imports | graphics |
| System Requirements | |
| URL |
See More
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| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
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| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | dualKS_1.44.0.tar.gz |
| Windows Binary | dualKS_1.44.0.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | dualKS_1.44.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/dualKS |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/dualKS |
| Bioc Package Browser | https://code.bioconductor.org/browse/dualKS/ |
| Package Short Url | https://bioconductor.org/packages/dualKS/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |