discordant
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see discordant.
The Discordant Method: A Novel Approach for Differential Correlation
Bioconductor version: 3.9
Discordant is a method to determine differential correlation of molecular feature pairs from -omics data using mixture models. Algorithm is explained further in Siska et al.
Author: Charlotte Siska [cre,aut], Katerina Kechris [aut]
Maintainer: Charlotte Siska <siska.charlotte at gmail.com>
citation("discordant")
):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("discordant")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("discordant")
Discordant | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | BiologicalQuestion, Genetics, ImmunoOncology, Microarray, RNASeq, Software, StatisticalMethod, mRNAMicroarray |
Version | 1.8.0 |
In Bioconductor since | BioC 3.5 (R-3.4) (7 years) |
License | GPL (>= 2) |
Depends | R (>= 3.4) |
Imports | Biobase, stats, biwt, gtools, MASS, tools |
System Requirements | |
URL | https://github.com/siskac/discordant |
See More
Suggests | BiocStyle, knitr |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | discordant_1.8.0.tar.gz |
Windows Binary | discordant_1.8.0.zip (32- & 64-bit) |
Mac OS X 10.11 (El Capitan) | discordant_1.8.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/discordant |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/discordant |
Bioc Package Browser | https://code.bioconductor.org/browse/discordant/ |
Package Short Url | https://bioconductor.org/packages/discordant/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.9 | Source Archive |