chopsticks
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see chopsticks.
The 'snp.matrix' and 'X.snp.matrix' Classes
Bioconductor version: 3.9
Implements classes and methods for large-scale SNP association studies
Author: Hin-Tak Leung <htl10 at users.sourceforge.net>
Maintainer: Hin-Tak Leung <htl10 at users.sourceforge.net>
Citation (from within R, enter
citation("chopsticks")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("chopsticks")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("chopsticks")| snpMatrix | R Script | |
| Reference Manual |
Details
| biocViews | GeneticVariability, Microarray, SNP, SNPsAndGeneticVariability, Software |
| Version | 1.50.0 |
| In Bioconductor since | BioC 2.8 (R-2.13) (13 years) |
| License | GPL-3 |
| Depends | |
| Imports | graphics, stats, utils, methods, survival |
| System Requirements | |
| URL | http://outmodedbonsai.sourceforge.net/ |
See More
| Suggests | hexbin |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | chopsticks_1.50.0.tar.gz |
| Windows Binary | chopsticks_1.50.0.zip |
| Mac OS X 10.11 (El Capitan) | chopsticks_1.50.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/chopsticks |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/chopsticks |
| Bioc Package Browser | https://code.bioconductor.org/browse/chopsticks/ |
| Package Short Url | https://bioconductor.org/packages/chopsticks/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |