annotationTools
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see annotationTools.
Annotate microarrays and perform cross-species gene expression analyses using flat file databases.
Bioconductor version: 3.9
Functions to annotate microarrays, find orthologs, and integrate heterogeneous gene expression profiles using annotation and other molecular biology information available as flat file database (plain text files).
Author: Alexandre Kuhn <alexandre.m.kuhn at gmail.com>
Maintainer: Alexandre Kuhn <alexandre.m.kuhn at gmail.com>
citation("annotationTools")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("annotationTools")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("annotationTools")| annotationTools Overview | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Annotation, Microarray, Software |
| Version | 1.58.0 |
| In Bioconductor since | BioC 2.0 (R-2.5) (17 years) |
| License | GPL |
| Depends | |
| Imports | Biobase, stats |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | DOQTL |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | annotationTools_1.58.0.tar.gz |
| Windows Binary | annotationTools_1.58.0.zip |
| Mac OS X 10.11 (El Capitan) | annotationTools_1.58.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/annotationTools |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/annotationTools |
| Bioc Package Browser | https://code.bioconductor.org/browse/annotationTools/ |
| Package Short Url | https://bioconductor.org/packages/annotationTools/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |