SQUADD
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see SQUADD.
Add-on of the SQUAD Software
Bioconductor version: 3.9
This package SQUADD is a SQUAD add-on. It permits to generate SQUAD simulation matrix, prediction Heat-Map and Correlation Circle from PCA analysis.
Author: Martial Sankar, supervised by Christian Hardtke and Ioannis Xenarios
Maintainer: Martial Sankar <martial.sankar at sib.swiss>
citation("SQUADD")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("SQUADD")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SQUADD")| SQUADD ERK exemple | R Script | |
| SQUADD HOW-TO | R Script | |
| Reference Manual |
Details
| biocViews | GraphAndNetwork, Network, Software, Visualization |
| Version | 1.34.0 |
| In Bioconductor since | BioC 2.7 (R-2.12) (13.5 years) |
| License | GPL (>=2) |
| Depends | R (>= 2.11.0) |
| Imports | graphics, grDevices, methods, RColorBrewer, stats, utils |
| System Requirements | |
| URL | http://www.unil.ch/dbmv/page21142_en.html |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | SQUADD_1.34.0.tar.gz |
| Windows Binary | SQUADD_1.34.0.zip |
| Mac OS X 10.11 (El Capitan) | SQUADD_1.34.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/SQUADD |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/SQUADD |
| Bioc Package Browser | https://code.bioconductor.org/browse/SQUADD/ |
| Package Short Url | https://bioconductor.org/packages/SQUADD/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |