Rtreemix

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see Rtreemix.

Rtreemix: Mutagenetic trees mixture models.


Bioconductor version: 3.9

Rtreemix is a package that offers an environment for estimating the mutagenetic trees mixture models from cross-sectional data and using them for various predictions. It includes functions for fitting the trees mixture models, likelihood computations, model comparisons, waiting time estimations, stability analysis, etc.

Author: Jasmina Bogojeska

Maintainer: Jasmina Bogojeska <jasmina.bogojeska at gmail.com>

Citation (from within R, enter citation("Rtreemix")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Rtreemix")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rtreemix")
Rtreemix PDF R Script
Reference Manual PDF

Details

biocViews Software, StatisticalMethod
Version 1.46.0
In Bioconductor since BioC 2.2 (R-2.7) (16 years)
License LGPL
Depends R (>= 2.5.0)
Imports methods, graph, Biobase, Hmisc
System Requirements
URL
See More
Suggests Rgraphviz
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Rtreemix_1.46.0.tar.gz
Windows Binary Rtreemix_1.46.0.zip
Mac OS X 10.11 (El Capitan) Rtreemix_1.46.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Rtreemix
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rtreemix
Bioc Package Browser https://code.bioconductor.org/browse/Rtreemix/
Package Short Url https://bioconductor.org/packages/Rtreemix/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.9 Source Archive