Pviz
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see Pviz.
Peptide Annotation and Data Visualization using Gviz
Bioconductor version: 3.9
Pviz adapts the Gviz package for protein sequences and data.
Author: Renan Sauteraud, Mike Jiang, Raphael Gottardo
Maintainer: Renan Sauteraud <rsautera at fhcrc.org>
Citation (from within R, enter
citation("Pviz")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Pviz")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Pviz")| The Pviz users guide | R Script | |
| Reference Manual |
Details
| biocViews | Microarray, Proteomics, Software, Visualization |
| Version | 1.18.0 |
| In Bioconductor since | BioC 3.0 (R-3.1) (9.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 3.0.0), Gviz(>= 1.7.10) |
| Imports | biovizBase, Biostrings, GenomicRanges, IRanges, data.table, methods |
| System Requirements | |
| URL |
See More
| Suggests | knitr, pepDat |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | Pbase |
| Suggests Me | pepStat |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | Pviz_1.18.0.tar.gz |
| Windows Binary | Pviz_1.18.0.zip |
| Mac OS X 10.11 (El Capitan) | Pviz_1.18.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/Pviz |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Pviz |
| Bioc Package Browser | https://code.bioconductor.org/browse/Pviz/ |
| Package Short Url | https://bioconductor.org/packages/Pviz/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |