Prize
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see Prize.
Prize: an R package for prioritization estimation based on analytic hierarchy process
Bioconductor version: 3.9
The high throughput studies often produce large amounts of numerous genes and proteins of interest. While it is difficult to study and validate all of them. Analytic Hierarchy Process (AHP) offers a novel approach to narrowing down long lists of candidates by prioritizing them based on how well they meet the research goal. AHP is a mathematical technique for organizing and analyzing complex decisions where multiple criteria are involved. The technique structures problems into a hierarchy of elements, and helps to specify numerical weights representing the relative importance of each element. Numerical weight or priority derived from each element allows users to find alternatives that best suit their goal and their understanding of the problem.
Author: Daryanaz Dargahi <daryanazdargahi at gmail.com>
Maintainer: Daryanaz Dargahi <daryanazdargahi at gmail.com>
citation("Prize")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Prize")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Prize")| Prize: an R package for prioritization estimation based on analytic hierarchy process | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | CellBiology, GeneExpression, ImmunoOncology, MultipleComparison, RNASeq, Software |
| Version | 1.14.0 |
| In Bioconductor since | BioC 3.2 (R-3.2) (8.5 years) |
| License | Artistic-2.0 |
| Depends | |
| Imports | diagram, stringr, ggplot2, reshape2, grDevices, matrixcalc, stats, gplots, methods, utils, graphics |
| System Requirements | |
| URL |
See More
| Suggests | RUnit, BiocGenerics |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | Prize_1.14.0.tar.gz |
| Windows Binary | Prize_1.14.0.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | Prize_1.14.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/Prize |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Prize |
| Bioc Package Browser | https://code.bioconductor.org/browse/Prize/ |
| Package Short Url | https://bioconductor.org/packages/Prize/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |