MSstatsQCgui
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see MSstatsQCgui.
A graphical user interface for MSstatsQC package
Bioconductor version: 3.9
MSstatsQCgui is a Shiny app which provides longitudinal system suitability monitoring and quality control tools for proteomic experiments.
Author: Eralp Dogu [aut, cre], Sara Taheri [aut], Olga Vitek [aut]
Maintainer: Eralp Dogu <eralp.dogu at gmail.com>
citation("MSstatsQCgui")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MSstatsQCgui")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MSstatsQCgui")| MSstatsQCgui | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | GUI, ImmunoOncology, MassSpectrometry, Proteomics, QualityControl, Software |
| Version | 1.4.0 |
| In Bioconductor since | BioC 3.7 (R-3.5) (6 years) |
| License | Artistic License 2.0 |
| Depends | |
| Imports | shiny, MSstatsQC, ggExtra, gridExtra, plotly, dplyr, RecordLinkage, grid |
| System Requirements | |
| URL | http://msstats.org/msstatsqc |
| Bug Reports | https://groups.google.com/forum/#!forum/msstatsqc |
See More
| Suggests | knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | MSstatsQCgui_1.4.0.tar.gz |
| Windows Binary | MSstatsQCgui_1.4.0.zip |
| Mac OS X 10.11 (El Capitan) | MSstatsQCgui_1.4.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/MSstatsQCgui |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/MSstatsQCgui |
| Bioc Package Browser | https://code.bioconductor.org/browse/MSstatsQCgui/ |
| Package Short Url | https://bioconductor.org/packages/MSstatsQCgui/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |