GeneAnswers
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see GeneAnswers.
Integrated Interpretation of Genes
Bioconductor version: 3.9
GeneAnswers provides an integrated tool for biological or medical interpretation of the given one or more groups of genes by means of statistical test.
Author: Lei Huang, Gang Feng, Pan Du, Tian Xia, Xishu Wang, Jing, Wen, Warren Kibbe and Simon Lin
Maintainer: Lei Huang <lhuang7 at uchicago.edu> and Gang Feng <gilbertfeng at gmail.com>
citation("GeneAnswers")
):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GeneAnswers")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GeneAnswers")
GeneAnswers | R Script | |
GeneAnswers web-based visualization module | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | DataRepresentation, GraphsAndNetworks, Infrastructure, Software, Visualization |
Version | 2.26.0 |
In Bioconductor since | BioC 2.5 (R-2.10) (14.5 years) |
License | LGPL (>= 2) |
Depends | R (>= 3.0.0), igraph, RCurl, annotate, Biobase(>= 1.12.0), methods, XML, RSQLite, MASS, Heatplus, RColorBrewer |
Imports | RBGL, annotate, downloader |
System Requirements | |
URL |
See More
Suggests | GO.db, KEGG.db, reactome.db, biomaRt, AnnotationDbi, org.Hs.eg.db, org.Rn.eg.db, org.Mm.eg.db, org.Dm.eg.db, graph |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | InterMineR |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | GeneAnswers_2.26.0.tar.gz |
Windows Binary | GeneAnswers_2.26.0.zip |
Mac OS X 10.11 (El Capitan) | GeneAnswers_2.26.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/GeneAnswers |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/GeneAnswers |
Bioc Package Browser | https://code.bioconductor.org/browse/GeneAnswers/ |
Package Short Url | https://bioconductor.org/packages/GeneAnswers/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.9 | Source Archive |