Cormotif
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see Cormotif.
Correlation Motif Fit
Bioconductor version: 3.9
It fits correlation motif model to multiple studies to detect study specific differential expression patterns.
Author: Hongkai Ji, Yingying Wei
Maintainer: Yingying Wei <ywei at jhsph.edu>
Citation (from within R, enter
citation("Cormotif")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Cormotif")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Cormotif")| Cormotif Vignette | R Script | |
| Reference Manual |
Details
| biocViews | DifferentialExpression, Microarray, Software |
| Version | 1.30.0 |
| In Bioconductor since | BioC 2.9 (R-2.14) (12.5 years) |
| License | GPL-2 |
| Depends | R (>= 2.12.0), affy, limma |
| Imports | affy, graphics, grDevices |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | Cormotif_1.30.0.tar.gz |
| Windows Binary | Cormotif_1.30.0.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | Cormotif_1.30.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/Cormotif |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Cormotif |
| Bioc Package Browser | https://code.bioconductor.org/browse/Cormotif/ |
| Package Short Url | https://bioconductor.org/packages/Cormotif/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |