CNVtools
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see CNVtools.
A package to test genetic association with CNV data
Bioconductor version: 3.9
This package is meant to facilitate the testing of Copy Number Variant data for genetic association, typically in case-control studies.
Author: Chris Barnes <christopher.barnes at imperial.ac.uk> and Vincent Plagnol <vincent.plagnol at cimr.cam.ac.uk>
Maintainer: Chris Barnes <christopher.barnes at imperial.ac.uk>
citation("CNVtools")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("CNVtools")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CNVtools")| Copy Number Variation Tools | R Script | |
| Reference Manual |
Details
| biocViews | GeneticVariability, Software |
| Version | 1.78.0 |
| In Bioconductor since | BioC 2.5 (R-2.10) (14.5 years) |
| License | GPL-3 |
| Depends | R (>= 2.10), survival |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
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| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | CNVtools_1.78.0.tar.gz |
| Windows Binary | CNVtools_1.78.0.zip |
| Mac OS X 10.11 (El Capitan) | CNVtools_1.78.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/CNVtools |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/CNVtools |
| Bioc Package Browser | https://code.bioconductor.org/browse/CNVtools/ |
| Package Short Url | https://bioconductor.org/packages/CNVtools/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |