CMA
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see CMA.
Synthesis of microarray-based classification
Bioconductor version: 3.9
This package provides a comprehensive collection of various microarray-based classification algorithms both from Machine Learning and Statistics. Variable Selection, Hyperparameter tuning, Evaluation and Comparison can be performed combined or stepwise in a user-friendly environment.
Author: Martin Slawski <ms at cs.uni-sb.de>, Anne-Laure Boulesteix <boulesteix at ibe.med.uni-muenchen.de>, Christoph Bernau <bernau at ibe.med.uni-muenchen.de>.
Maintainer: Roman Hornung <hornung at ibe.med.uni-muenchen.de>
citation("CMA")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("CMA")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CMA")| CMA_vignette.pdf | R Script | |
| Reference Manual |
Details
| biocViews | Classification, DecisionTree, Software |
| Version | 1.42.0 |
| In Bioconductor since | BioC 2.3 (R-2.8) (15.5 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.10), methods, stats, Biobase |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | MASS, class, nnet, glmnet, e1071, randomForest, plsgenomics, gbm, mgcv, corpcor, limma, st, mvtnorm |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | CMA_1.42.0.tar.gz |
| Windows Binary | CMA_1.42.0.zip |
| Mac OS X 10.11 (El Capitan) | CMA_1.42.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/CMA |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/CMA |
| Bioc Package Browser | https://code.bioconductor.org/browse/CMA/ |
| Package Short Url | https://bioconductor.org/packages/CMA/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |