BRAIN
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see BRAIN.
Baffling Recursive Algorithm for Isotope distributioN calculations
Bioconductor version: 3.9
Package for calculating aggregated isotopic distribution and exact center-masses for chemical substances (in this version composed of C, H, N, O and S). This is an implementation of the BRAIN algorithm described in the paper by J. Claesen, P. Dittwald, T. Burzykowski and D. Valkenborg.
Author: Piotr Dittwald, with contributions of Dirk Valkenborg and Jurgen Claesen
Maintainer: Piotr Dittwald <piotr.dittwald at mimuw.edu.pl>
citation("BRAIN")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BRAIN")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BRAIN")| BRAIN Usage | R Script | |
| Reference Manual |
Details
| biocViews | ImmunoOncology, MassSpectrometry, Proteomics, Software |
| Version | 1.30.0 |
| In Bioconductor since | BioC 2.10 (R-2.15) (12 years) |
| License | GPL-2 |
| Depends | R (>= 2.8.1), PolynomF, Biostrings, lattice |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | cleaver, RforProteomics, synapter |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | BRAIN_1.30.0.tar.gz |
| Windows Binary | BRAIN_1.30.0.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | BRAIN_1.30.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/BRAIN |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BRAIN |
| Bioc Package Browser | https://code.bioconductor.org/browse/BRAIN/ |
| Package Short Url | https://bioconductor.org/packages/BRAIN/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |