AGDEX
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see AGDEX.
Agreement of Differential Expression Analysis
Bioconductor version: 3.9
A tool to evaluate agreement of differential expression for cross-species genomics
Author: Stan Pounds <stanley.pounds at stjude.org>; Cuilan Lani Gao <cuilan.gao at stjude.org>
Maintainer: Cuilan lani Gao <cuilan.gao at stjude.org>
Citation (from within R, enter
citation("AGDEX")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("AGDEX")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("AGDEX")| AGDEX.pdf | R Script | |
| Reference Manual |
Details
| biocViews | GeneExpression, Genetics, Microarray, Software |
| Version | 1.32.0 |
| In Bioconductor since | BioC 2.9 (R-2.14) (12.5 years) |
| License | GPL Version 2 or later |
| Depends | R (>= 2.10), Biobase, GSEABase |
| Imports | stats |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
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| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | AGDEX_1.32.0.tar.gz |
| Windows Binary | AGDEX_1.32.0.zip |
| Mac OS X 10.11 (El Capitan) | AGDEX_1.32.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/AGDEX |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/AGDEX |
| Bioc Package Browser | https://code.bioconductor.org/browse/AGDEX/ |
| Package Short Url | https://bioconductor.org/packages/AGDEX/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |