alpineData
This package is for version 3.8 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see alpineData.
Data for the alpine package vignette
Bioconductor version: 3.8
A small subset of paired-end RNA-seq reads from four samples of the GEUVADIS project.
Author: Michael Love
Maintainer: Michael Love <michaelisaiahlove at gmail.com>
Citation (from within R, enter
citation("alpineData")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("alpineData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("alpineData")| tximport | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | ExperimentData, ExpressionData, RNASeqData, SequencingData |
| Version | 1.8.0 |
| License | GPL (>=2) |
| Depends | ExperimentHub, GenomicAlignments |
| Imports | utils, AnnotationHub |
| System Requirements | |
| URL |
See More
| Suggests | GenomicAlignments, knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | alpine |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | alpineData_1.8.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/alpineData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/alpineData |
| Package Short Url | https://bioconductor.org/packages/alpineData/ |
| Package Downloads Report | Download Stats |