drawProteins
This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see drawProteins.
Package to Draw Protein Schematics from Uniprot API output
Bioconductor version: 3.7
This package draws protein schematics from Uniprot API output. From the JSON returned by the GET command, it creates a dataframe from the Uniprot Features API. This dataframe can then be used by geoms based on ggplot2 and base R to draw protein schematics.
Author: Paul Brennan [aut, cre]
Maintainer: Paul Brennan <brennanpincardiff at gmail.com>
citation("drawProteins")
):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("drawProteins")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("drawProteins")
Using drawProteins | HTML | R Script |
Using drawProteins | HTML | R Script |
Reference Manual | ||
NEWS | Text | |
LICENSE | Text |
Details
biocViews | FunctionalPrediction, Proteomics, Software, Visualization |
Version | 1.0.0 |
In Bioconductor since | BioC 3.7 (R-3.5) (6 years) |
License | MIT + file LICENSE |
Depends | R (>= 3.4) |
Imports | ggplot2, httr, dplyr |
System Requirements | |
URL | https://github.com/brennanpincardiff/drawProteins |
Bug Reports | https://github.com/brennanpincardiff/drawProteins/issues/new |
See More
Suggests | covr, testthat, knitr, rmarkdown, BiocStyle |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | drawProteins_1.0.0.tar.gz |
Windows Binary | drawProteins_1.0.0.zip |
Mac OS X 10.11 (El Capitan) | drawProteins_1.0.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/drawProteins |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/drawProteins |
Package Short Url | https://bioconductor.org/packages/drawProteins/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.7 | Source Archive |