MBCB

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see MBCB.

MBCB (Model-based Background Correction for Beadarray)


Bioconductor version: 3.7

This package provides a model-based background correction method, which incorporates the negative control beads to pre-process Illumina BeadArray data.

Author: Yang Xie <Yang.Xie at UTSouthwestern.edu>

Maintainer: Jeff Allen <Jeffrey.Allen at UTSouthwestern.edu>

Citation (from within R, enter citation("MBCB")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MBCB")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MBCB")
MBCB PDF R Script
Reference Manual PDF

Details

biocViews Microarray, Preprocessing, Software
Version 1.34.0
In Bioconductor since BioC 2.7 (R-2.12) (13.5 years)
License GPL (>= 2)
Depends R (>= 2.9.0), tcltk, tcltk2
Imports preprocessCore, stats, utils
System Requirements
URL http://www.utsouthwestern.edu
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MBCB_1.34.0.tar.gz
Windows Binary MBCB_1.34.0.zip
Mac OS X 10.11 (El Capitan) MBCB_1.34.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MBCB
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MBCB
Package Short Url https://bioconductor.org/packages/MBCB/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.7 Source Archive