LVSmiRNA

This package is for version 3.7 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see LVSmiRNA.

LVS normalization for Agilent miRNA data

Bioconductor version: 3.7

Normalization of Agilent miRNA arrays.

Author: Stefano Calza, Suo Chen, Yudi Pawitan

Maintainer: Stefano Calza <stefano.calza at unibs.it>

Citation (from within R, enter citation("LVSmiRNA")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("LVSmiRNA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("LVSmiRNA")

LVSmiRNA.pdf	PDF	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	AgilentChip, Microarray, OneChannel, Preprocessing, Software
Version	1.30.0
In Bioconductor since	BioC 2.7 (R-2.12) (13.5 years)
License	GPL-2
Depends	R (>= 3.1.0), methods, splines
Imports	BiocGenerics, stats4, graphics, stats, utils, MASS, Biobase, quantreg, limma, affy, SparseM, vsn, zlibbioc
System Requirements
URL

Suggests
Linking To
Enhances	parallel, snow, Rmpi
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	LVSmiRNA_1.30.0.tar.gz
Windows Binary	LVSmiRNA_1.30.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	LVSmiRNA_1.30.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/LVSmiRNA
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/LVSmiRNA
Package Short Url	https://bioconductor.org/packages/LVSmiRNA/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.7	Source Archive