Director
This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see Director.
A dynamic visualization tool of multi-level data
Bioconductor version: 3.7
Director is an R package designed to streamline the visualization of molecular effects in regulatory cascades. It utilizes the R package htmltools and a modified Sankey plugin of the JavaScript library D3 to provide a fast and easy, browser-enabled solution to discovering potentially interesting downstream effects of regulatory and/or co-expressed molecules. The diagrams are robust, interactive, and packaged as highly-portable HTML files that eliminate the need for third-party software to view. This enables a straightforward approach for scientists to interpret the data produced, and bioinformatics developers an alternative means to present relevant data.
Author: Katherine Icay [aut, cre]
Maintainer: Katherine Icay <katherine.icay at helsinki.fi>
citation("Director")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Director")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Director")| Using Director | R Script | |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | Software, Visualization |
| Version | 1.6.0 |
| In Bioconductor since | BioC 3.4 (R-3.3) (7.5 years) |
| License | GPL-3 + file LICENSE |
| Depends | R (>= 3.3) |
| Imports | htmltools, utils, grDevices |
| System Requirements | |
| URL | https://github.com/kzouchka/Director |
| Bug Reports | https://github.com/kzouchka/Director/issues |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | Director_1.6.0.tar.gz |
| Windows Binary | Director_1.6.0.zip |
| Mac OS X 10.11 (El Capitan) | Director_1.6.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/Director |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Director |
| Package Short Url | https://bioconductor.org/packages/Director/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.7 | Source Archive |