- Home
- Bioconductor 3.5
- Experiment Packages
- TCGAWorkflowData
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("TCGAWorkflowData")
In most cases, you don't need to download the package archive at all.
TCGAWorkflowData
|
|
|
|
Data for TCGA Workflow
Bioconductor version: Release (3.5)
This experimental data package contains 11 data sets necessary to follow the "TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages".
Author: Tiago Chedraoui Silva <tiagochst at usp.br>
Maintainer: Tiago Chedraoui Silva <tiagochst at usp.br>
Citation (from within R,
enter citation("TCGAWorkflowData")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("TCGAWorkflowData")
Documentation
| HTML | R Script | 'Example data for TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages' |
| Reference Manual |
Details
| biocViews | CancerData, ExperimentData, Homo_sapiens_Data, MicroarrayData |
| Version | 1.0.0 |
| License | GPL-3 |
| Depends | R (>= 3.4.0) |
| Imports | SummarizedExperiment |
| LinkingTo | |
| Suggests | knitr, rmarkdown, pander, testthat |
| SystemRequirements | |
| Enhances | |
| URL | https://f1000research.com/articles/5-1542/v2 |
| BugReports | https://github.com/BioinformaticsFMRP/TCGAWorkflow/issues |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | TCGAWorkflowData_1.0.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/TCGAWorkflowData |
| Package Short Url | http://bioconductor.org/packages/TCGAWorkflowData/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
