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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("HumanAffyData")
In most cases, you don't need to download the package archive at all.
HumanAffyData
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GEO accession GSE64985 and ArrayExpress accession E-MTAB-62 as ExpressionSet objects
Bioconductor version: Release (3.5)
Re-analysis of human gene expression data generated on the Affymetrix HG_U133PlusV2 (EH176) and Affymetrix HG_U133A (EH177) platforms. The original data were normalized using robust multiarray averaging (RMA) to obtain an integrated gene expression atlas across diverse biological sample types and conditions. The entire compendia comprisee 9395 arrays for EH176 and 5372 arrays for EH177.
Author: Brad Nelms
Maintainer: Brad Nelms <bnelms.research at gmail.com>
Citation (from within R,
enter citation("HumanAffyData")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("HumanAffyData")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("HumanAffyData")
| R Script | Intro to the HumanAffyData package | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | ArrayExpress, ExperimentData, ExpressionData, GEO, Homo_sapiens_Data, MicroarrayData |
| Version | 1.2.0 |
| License | Artistic-2.0 |
| Depends | ExperimentHub, Biobase, R (>= 3.3) |
| Imports | |
| LinkingTo | |
| Suggests | BiocStyle |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | CellMapper |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | HumanAffyData_1.2.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/HumanAffyData |
| Package Short Url | http://bioconductor.org/packages/HumanAffyData/ |
| Package Downloads Report | Download Stats |
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