- Home
- Bioconductor 3.5
- Annotation Packages
- greengenes13.5MgDb
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("greengenes13.5MgDb")
In most cases, you don't need to download the package archive at all.
greengenes13.5MgDb
|
|
|
Greengenes 13.5 16S rRNA Database Annotation Data
Bioconductor version: Release (3.5)
Metagenome annotation package with for the Greengenes 16S rRNA Database version 13.5. Contains a MgDb-class object, defined in the metagenomeFeatures package.
Author: Nathan D. Olson <nolson at umias.umd.edu>, Joseph Nathaniel Paulson, Hector Corrada-Bravo
Maintainer: Nathan D. Olson <nolson at umiacs.umd.edu>
Citation (from within R,
enter citation("greengenes13.5MgDb")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("greengenes13.5MgDb")
Documentation
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | AnnotationData |
| Version | 1.0.0 |
| License | Artistic-2.0 |
| Depends | R (>= 3.3.0), methods |
| Imports | metagenomeFeatures |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | https://github.com/HCBravoLab/greengenes13.5MgDb |
| BugReports | https://github.com/HCBravoLab/greengenes13.5MgDb/issues |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Package Short Url | http://bioconductor.org/packages/greengenes13.5MgDb/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
