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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MafDb.ExAC.r1.0.nonTCGA.hs37d5")
In most cases, you don't need to download the package archive at all.
MafDb.ExAC.r1.0.nonTCGA.hs37d5
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Minor allele frequency data from ExAC release 1.0 subset of nonTCGA exomes for hs37d5
Bioconductor version: Release (3.5)
Store minor allele frequency data from the Exome Aggregation Consortium (ExAC release 1.0 subset of nonTCGA exomes) for the human genome version hs37d5.
Author: Robert Castelo
Maintainer: Robert Castelo <robert.castelo at upf.edu>
Citation (from within R,
enter citation("MafDb.ExAC.r1.0.nonTCGA.hs37d5")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MafDb.ExAC.r1.0.nonTCGA.hs37d5")
Documentation
| Reference Manual |
Details
| biocViews | AnnotationData, Genetics, Homo_sapiens, MafDb |
| Version | 3.5.0 |
| License | Artistic-2.0 |
| Depends | R (>= 3.0.0), VariantFiltering(>= 1.11.5) |
| Imports | utils, S4Vectors, IRanges, GenomicRanges, BSgenome |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | MafDb.ExAC.r1.0.nonTCGA.hs37d5_3.5.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Package Short Url | http://bioconductor.org/packages/MafDb.ExAC.r1.0.nonTCGA.hs37d5/ |
| Package Downloads Report | Download Stats |
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