CHANGES IN VERSION 1.9.4

- fixed remap=FALSE bug in compare app <2017-01-12 Thu>
- Added mirrorX and mirrorY to the compare app <2017-01-12 Thu>

CHANGES IN VERSION 1.9.3

- Update vignette use latest BiocStyle::html_document2() with
   floating table-f content <2016-12-30 Fri>
- Change to NEWS.md <2016-12-30 Fri>
- mirrorX and mirrorY are now ignored in pRolocVis - see issue #84
  <2017-01-11 Wed>

CHANGES IN VERSION 1.9.2

- Remove accidental merging left-over <2016-12-13 Tue>
 
CHANGES IN VERSION 1.9.1

- Remove accidental call to browser 

CHANGES IN VERSION 1.9.0

- Bioc devel 3.5



CHANGES IN VERSION 1.8.0

- Bioc release 3.4



CHANGES IN VERSION 1.7.5

- Various bug fixes <2016-10-07 Fri>
 
CHANGES IN VERSION 1.7.4

- Add DT version dependency (see issue #71) <2016-08-09 Tue>
 
CHANGES IN VERSION 1.7.3

- Fixed bug with matrix-f markers in fcol. Now if-ne-f the 
   columns in the feature data is a matrix, it is converted to
   a vector using mrkMatToVec. This helps clarity and reduces 
   wasted table space-f 1's and 0's. <2016-07-29 Fri>  
- Fixed bug in pRolocVis_compare application. Same issue as
   above with passing matrix as a fcol which manifested as an
   extra issue with zooming. Now fixed. <2016-07-29 Fri>



CHANGES IN VERSION 1.5.7

- Fixed bug in pRolocVis in converting GO ids <2016-05-26 Thu>

CHANGES IN VERSION 1.5.6

- Removing plotMat2D app (closes issue #69) <2016-03-11 Fri>
- add package startup msg <2016-03-11 Fri>
- instruct users to install latest version from github
 
CHANGES IN VERSION 1.5.5

- Depend-n DT >= 0.1.40
 
CHANGES IN VERSION 1.5.4

- replace getLisacol by getStockcol (which are now Lisa's colours;
   since pRoloc version 1.11.9) <2016-02-16 Tue>
 
CHANGES IN VERSION 1.5.3

- update refs in vignette <2016-02-09 Tue>
 
CHANGES IN VERSION 1.5.2

- Updated pca app <2016-01-11 Mon>
- Updated vignette <2016-01-12 Tue>
- Fixed bugs, pca app renamed main app, removed
   profiles app <2016-01-14 Thu>
- new compare app <2016-01-30 Sat> 
- updated vignette <2016-02-03 Wed> 

CHANGES IN VERSION 1.5.1

- New shiny apps <2015-10-12 Mon>
- New vignette <2015-10-29 Thu>
- Fixed bugs and updated examples in classify app 
   <2015-11-09 Mon> 
 
CHANGES IN VERSION 1.5.0

- Bioc devel 3.3
 

 
CHANGES IN VERSION 1.4.0

- Bioc release 3.2
 


CHANGES IN VERSION 1.3.2

- Fix check warnings and errors <2015-07-20 Mon>
 
CHANGES IN VERSION 1.3.1

- new plotMat2D function <2015-05-20 Wed>
- Fix query search in pRolocVis, contributed by pierremj
   <2015-05-27 Wed>
- pRolocVis has new method arg <2015-05-29 Fri>
 
CHANGES IN VERSION 1.3.0

- Devel for Bioc 3.2



CHANGES IN VERSION 1.2.0

- Release for Bioc 3.1
 

 
CHANGES IN VERSION 1.1.5

- updating failing unit test [2015-04-03 Fri]
 
CHANGES IN VERSION 1.1.4

- fix R_HOME error [2015-02-26 Thu]
 
CHANGES IN VERSION 1.1.3

- don't require GNU make [2015-02-11 Wed]
 
CHANGES IN VERSION 1.1.2

- Fix bug with FoIs and multiple data sets (reported by Harriet
   Parsons) [2015-02-06 Fri]

CHANGES IN VERSION 1.1.1

- Update README with uptodate installation instructions
   [2014-10-14 Tue]
- handling and filtering missing value in input data [2014-10-21 Tue]



CHANGES IN VERSION 1.0.0

- Release for Bioc 3.0 [2014-10-14 Tue]



CHANGES IN VERSION 0.99.12

- added Video tag in DESCRIPTION [2014-10-07 Tue]

CHANGES IN VERSION 0.99.11

- Add screenshot to README [2014-09-05 Fri]
- fix bug when features-f fois are not present 
- move data tab to the end

CHANGES IN VERSION 0.99.10

- Updated README [2014-09-04 Thu]
- Remove-ld R code file [2014-09-04]

CHANGES IN VERSION 0.99.9

- fix vignette error-n Windows (Dan Tenenbaum) [2014-08-26 Tue]

CHANGES IN VERSION 0.99.8

- selection and display-f multiple features-f interest in pRolocVis and
   pRolocComp [2014-08-13 Wed]

CHANGES IN VERSION 0.99.7

- display feature meta-data instead-f protein name when hovering
   [2014-07-27 Tue]
- better feature highlighting [2014-07-27 Tue]
--nly 1 vignette [2014-07-27 Tue]

CHANGES IN VERSION 0.99.6

- support mirroring-f PCA plots in pRolocComp [2014-07-22 Tue]

CHANGES IN VERSION 0.99.5

- Update to latest knitcitations version and fix vignette
   [2014-07-15 Tue]

CHANGES IN VERSION 0.99.4

- add function pRolocComp [2014-06-24 Tue]

CHANGES IN VERSION 0.99.3

- multiple-bjects can be passed to pRolocVis by using a list [2014-06-03 Tue] 
- improve query search (submit and select check box) [2014-06-02 Mon]
- add unit tests for helper functions and add manual unit test [2014-06-03 Tue]

CHANGES IN VERSION 0.99.2

- change access and assignment to-bject pRolocGUI_SearchResults in
   .GlobalEnv [2014-05-30 Fri]

CHANGES IN VERSION 0.99.1

- fix biocViews [2014-05-27 Tue]
- misc refactoring [2014-05-27 Tue]

CHANGES IN VERSION 0.99.0

- Bioc submission