CHANGES IN VERSION 1.3.5 --------------------------- FEATURES o Add isomiRs naming to documentation o Add design to the object to get better usability o Remove non-template addition with C/G nucleotides by default (canonicalAdd) o Remove sequences with mutations and more than one miRNA hit CHANGES IN VERSION 1.3.4 --------------------------- FIXES o Fix removing false mutations from the raw files. Change sequences to correct the nucleotide at the specific position. FEATURES o Improve code to remove error sequencing from raw data o Improve code to show the raw data with isoSelect CHANGES IN VERSION 1.3.3 --------------------------- FIXES o Fix data with correct headers name CHANGES IN VERSION 1.3.2 --------------------------- OTHERS o Preparing migration to new isomiRs naming using mirTOP naming system CHANGES IN VERSION 1.3.1 --------------------------- OTHERS o Add option to IsomirDataSeqFromFiles to decide when to consider mutations as reals CHANGES IN VERSION 1.1.5 --------------------------- OTHERS o Suppress message from readr when reading o Add instruction of how to create DESeq2 object from ids one. CHANGES IN VERSION 1.1.4 --------------------------- OTHERS o Add mRNA-miRNA integration CHANGES IN VERSION 1.1.2 --------------------------- OTHERS o Update version dependecy for packages CHANGES IN VERSION 0.99.18 --------------------------- BUG FIXES o Avoid removing isomiRs with mutation and reference non-detected CHANGES IN VERSION 0.99.13 --------------------------- NEW FEATURES o Modify main class to have all the information in metadata o Improve docs with more information in return values o Add minimum data to test creation of main class