To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("rBiopaxParser")

In most cases, you don't need to download the package archive at all.

rBiopaxParser

Parses BioPax files and represents them in R

Bioconductor version: Release (3.5)

Parses BioPAX files and represents them in R, at the moment BioPAX level 2 and level 3 are supported.

Author: Frank Kramer

Maintainer: Frank Kramer <dev at frankkramer.de>

Citation (from within R, enter citation("rBiopaxParser")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("rBiopaxParser")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rBiopaxParser")

biocViews	DataRepresentation, Software
Version	2.16.0
In Bioconductor since	BioC 2.12 (R-3.0) (4.5 years)
License	GPL (>= 2)
Depends	R (>= 3.0.0), data.table
Imports	XML
LinkingTo
Suggests	Rgraphviz, RCurl, graph, RUnit, BiocGenerics, nem, RBGL, igraph
SystemRequirements
Enhances
URL	https://github.com/frankkramer-lab/rBiopaxParser
Depends On Me
Imports Me	AnnotationHubData, pwOmics
Suggests Me	AnnotationHub, NetPathMiner
Build Report

Follow Installation instructions to use this package in your R session.

Source Package	rBiopaxParser_2.16.0.tar.gz
Windows Binary	rBiopaxParser_2.16.0.zip
Mac OS X 10.11 (El Capitan)	rBiopaxParser_2.16.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/rBiopaxParser
Package Short Url	http://bioconductor.org/packages/rBiopaxParser/
Package Downloads Report	Download Stats

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