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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("IWTomics")
In most cases, you don't need to download the package archive at all.
IWTomics
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Interval-Wise Testing for Omics Data
Bioconductor version: Release (3.5)
Implementation of the Interval-Wise Testing (IWT) for omics data. This inferential procedure tests for differences in "Omics" data between two groups of genomic regions (or between a group of genomic regions and a reference center of symmetry), and does not require fixing location and scale at the outset.
Author: Marzia A Cremona, Alessia Pini, Francesca Chiaromonte, Simone Vantini
Maintainer: Marzia A Cremona <mac78 at psu.edu>
Citation (from within R,
enter citation("IWTomics")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("IWTomics")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("IWTomics")
| R Script | Introduction to IWTomics | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | DataImport, DifferentialExpression, DifferentialMethylation, DifferentialPeakCalling, GenomeAnnotation, MultipleComparison, Software, StatisticalMethod |
| Version | 1.0.0 |
| In Bioconductor since | BioC 3.5 (R-3.4) (0.5 years) |
| License | GPL (>=2) |
| Depends | GenomicRanges |
| Imports | parallel, gtable, grid, graphics, methods, IRanges, KernSmooth, fda, S4Vectors, grDevices, stats, utils, tools |
| LinkingTo | |
| Suggests | knitr |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | IWTomics_1.0.0.tar.gz |
| Windows Binary | IWTomics_1.0.0.zip |
| Mac OS X 10.11 (El Capitan) | IWTomics_1.0.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/IWTomics |
| Package Short Url | http://bioconductor.org/packages/IWTomics/ |
| Package Downloads Report | Download Stats |
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