# Population-level Representation on scRNA-Seq data

## Documentation for package ‘GloScope’ version 2.0.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

bootCI | Calculate metrics on separation in distance matrix due to grouping variable
bootGloscope | Calculate metrics on separation in distance matrix due to grouping variable
example_SCE | SingleCellExperiment containing example inputs to GloScope
example_SCE_small | SingleCellExperiment containing example inputs to GloScope
getMetrics | Calculate metrics on separation in distance matrix due to grouping variable
gloscope | Calculate statistical divergence between all sample pairs
gloscopeProp | Calculate divergence between all sample pairs' cell type proportion
plotCI | Plot confidence intervals
plotHeatmap | Plot a heatmap of the GloScope represenation
plotMDS | Plot the multidimensional scaling of the GloScope represenation