BSgenome.Vvinifera.URGI.IGGP12Xv2

This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Vvinifera.URGI.IGGP12Xv2.

Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (IGGP version 12Xv2)

Bioconductor version: 3.19

Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (derived from Pinot Noir and close to homozygosity after 6-9 rounds of selfing) as assembled by the IGGP (version 12Xv2) and available at the URGI (INRA)

Author: Timothee Flutre [cre,aut]

Maintainer: Timothee Flutre <timothee.flutre at supagro.inra.fr>

Citation (from within R, enter citation("BSgenome.Vvinifera.URGI.IGGP12Xv2")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Vvinifera.URGI.IGGP12Xv2")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation


Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	AnnotationData, BSgenome, Genetics, Vitis_vinifera
Version	0.1
License	CC0
Depends	BSgenome(>= 1.38.0)
Imports	BSgenome
System Requirements
URL

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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BSgenome.Vvinifera.URGI.IGGP12Xv2_0.1.tar.gz
Windows Binary (x86_64)
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Package Short Url	https://bioconductor.org/packages/BSgenome.Vvinifera.URGI.IGGP12Xv2/
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