switchBox
This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see switchBox.
Utilities to train and validate classifiers based on pair switching using the K-Top-Scoring-Pair (KTSP) algorithm
Bioconductor version: 3.19
The package offer different classifiers based on comparisons of pair of features (TSP), using various decision rules (e.g., majority wins principle).
Author: Bahman Afsari <bahman at jhu.edu>, Luigi Marchionni <marchion at jhu.edu>, Wikum Dinalankara <wdinala1 at jhmi.edu>
Maintainer: Bahman Afsari <bahman at jhu.edu>, Luigi Marchionni <marchion at jhu.edu>, Wikum Dinalankara <wdinala1 at jhmi.edu>
citation("switchBox")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("switchBox")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("switchBox")| Working with the switchBox package | R Script | |
| Reference Manual |
Details
| biocViews | Classification, Software, StatisticalMethod |
| Version | 1.40.0 |
| In Bioconductor since | BioC 3.0 (R-3.1) (10 years) |
| License | GPL-2 |
| Depends | R (>= 2.13.1), pROC, gplots |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | PDATK |
| Suggests Me | multiclassPairs |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | switchBox_1.40.0.tar.gz |
| Windows Binary (x86_64) | switchBox_1.40.0.zip |
| macOS Binary (x86_64) | switchBox_1.40.0.tgz |
| macOS Binary (arm64) | switchBox_1.40.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/switchBox |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/switchBox |
| Bioc Package Browser | https://code.bioconductor.org/browse/switchBox/ |
| Package Short Url | https://bioconductor.org/packages/switchBox/ |
| Package Downloads Report | Download Stats |