Changes in version 1.7.7 (2021-02-24) + Moved all recipes to https://github.com/rworkflow/RcwlRecipes. + Added new core functions: cwlUpdate, cwlSearch and cwlLoad. + Core functions return a 'cwlHub' object. Changes in version 1.1.14 (2019-10-21) + Add pvactools neoantigen prediction pipeline Changes in version 1.1.8 (2019-08-22) + Add more Somatic Variant Callers: VarScan2, LoFreq, MuSE, SomaticSniper, VarDict, lancet, manta, strelka2 Changes in version 1.1.5 (2019-07-19) + Structure updates: export all tools and pipelines. + Added GATK4 Mutect2 tools and pipelines. + Added Command and Container to metadata of cwlTools. + Vignette updated. Changes in version 1.1.2 (2019-05-22) + fix samtools index bug for cwltool 2019 Changes in version 1.0.1 (2019-05-06) + fix mc3 path bug. Changes in version 0.99.10 (2019-03-27) + Submitted to Bioconductor + 27 tools were collected. Changes in version 0.99.11 (2019-03-27) + 10 more tools were added.