miRNAmeConverter

This package is for version 3.18 of Bioconductor; for the stable, up-to-date release version, see miRNAmeConverter.

Convert miRNA Names to Different miRBase Versions

Bioconductor version: 3.18

Translating mature miRNA names to different miRBase versions, sequence retrieval, checking names for validity and detecting miRBase version of a given set of names (data from http://www.mirbase.org/).

Author: Stefan Haunsberger [aut, cre]

Maintainer: Stefan J. Haunsberger <stefan.haunsberger at gmail.com>

Citation (from within R, enter citation("miRNAmeConverter")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("miRNAmeConverter")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation


Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Preprocessing, Software, miRNA
Version	1.30.0
In Bioconductor since	BioC 3.3 (R-3.3) (8 years)
License	Artistic-2.0
Depends	miRBaseVersions.db
Imports	DBI, AnnotationDbi, reshape2
System Requirements
URL

Suggests	methods, testthat, knitr, rmarkdown
Linking To
Enhances
Depends On Me
Imports Me
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Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	miRNAmeConverter_1.30.0.tar.gz
Windows Binary	miRNAmeConverter_1.30.0.zip (64-bit only)
macOS Binary (x86_64)	miRNAmeConverter_1.30.0.tgz
macOS Binary (arm64)	miRNAmeConverter_1.30.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/miRNAmeConverter
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/miRNAmeConverter
Bioc Package Browser	https://code.bioconductor.org/browse/miRNAmeConverter/
Package Short Url	https://bioconductor.org/packages/miRNAmeConverter/
Package Downloads Report	Download Stats