ipdDb
This package is for version 3.18 of Bioconductor; for the stable, up-to-date release version, see ipdDb.
IPD IMGT/HLA and IPD KIR database for Homo sapiens
Bioconductor version: 3.18
All alleles from the IPD IMGT/HLA
Author: Steffen Klasberg
Maintainer: Steffen Klasberg <klasberg at dkms-lab.de>
citation("ipdDb")
):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ipdDb")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ipdDb")
ipdDb | HTML | R Script |
Reference Manual | ||
NEWS | Text |
Details
biocViews | AnnotationHubSoftware, DataRepresentation, GenomicVariation, SequenceMatching, Software, VariantAnnotation |
Version | 1.20.0 |
In Bioconductor since | BioC 3.8 (R-3.5) (5.5 years) |
License | Artistic-2.0 |
Depends | R (>= 3.5.0), methods, AnnotationDbi(>= 1.43.1), AnnotationHub |
Imports | Biostrings, GenomicRanges, RSQLite, DBI, IRanges, stats, assertthat |
System Requirements | |
URL | https://github.com/DKMS-LSL/ipdDb |
Bug Reports | https://github.com/DKMS-LSL/ipdDb/issues/new |
See More
Suggests | knitr, rmarkdown, testthat |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | ipdDb_1.20.0.tar.gz |
Windows Binary | ipdDb_1.20.0.zip |
macOS Binary (x86_64) | ipdDb_1.20.0.tgz |
macOS Binary (arm64) | ipdDb_1.20.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/ipdDb |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ipdDb |
Bioc Package Browser | https://code.bioconductor.org/browse/ipdDb/ |
Package Short Url | https://bioconductor.org/packages/ipdDb/ |
Package Downloads Report | Download Stats |