flowDensity

This package is for version 3.18 of Bioconductor; for the stable, up-to-date release version, see flowDensity.

Sequential Flow Cytometry Data Gating

Bioconductor version: 3.18

This package provides tools for automated sequential gating analogous to the manual gating strategy based on the density of the data.

Author: Mehrnoush Malek,M. Jafar Taghiyar

Maintainer: Mehrnoush Malek <mehrmalek at gmail.com>

Citation (from within R, enter citation("flowDensity")):

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowDensity")

For older versions of R, please refer to the appropriate Bioconductor release.

biocViews	Bioinformatics, Cancer, CellBiology, Clustering, DataRepresentation, DensityGating, FlowCytData, FlowCytometry, Software, StemCell
Version	1.36.1
In Bioconductor since	BioC 3.0 (R-3.1) (9.5 years)
License	Artistic-2.0
Depends
Imports	flowCore, graphics, flowViz(>= 1.42), car, polyclip, gplots, methods, stats, grDevices
System Requirements	xml2, GNU make, C++11
URL

Suggests	knitr, rmarkdown
Linking To
Enhances
Depends On Me
Imports Me	cyanoFilter, ddPCRclust, flowCut
Suggests Me
Links To Me
Build Report	Build Report

Follow Installation instructions to use this package in your R session.

Source Package	flowDensity_1.36.1.tar.gz
Windows Binary	flowDensity_1.36.1.zip
macOS Binary (x86_64)	flowDensity_1.36.1.tgz
macOS Binary (arm64)	flowDensity_1.36.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/flowDensity
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/flowDensity
Bioc Package Browser	https://code.bioconductor.org/browse/flowDensity/
Package Short Url	https://bioconductor.org/packages/flowDensity/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.18	Source Archive