RefPlus
This package is for version 3.18 of Bioconductor; for the stable, up-to-date release version, see RefPlus.
A function set for the Extrapolation Strategy (RMA+) and Extrapolation Averaging (RMA++) methods.
Bioconductor version: 3.18
The package contains functions for pre-processing Affymetrix data using the RMA+ and the RMA++ methods.
Author: Kai-Ming Chang <kaiming at gmail.com>, Chris Harbron <Chris.Harbron at astrazeneca.com>, Marie C South <Marie.C.South at astrazeneca.com>
Maintainer: Kai-Ming Chang <kaiming at gmail.com>
Citation (from within R, enter
citation("RefPlus")
):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("RefPlus")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Reference Manual |
Details
biocViews | Microarray, OneChannel, Preprocessing, Software |
Version | 1.72.0 |
In Bioconductor since | BioC 2.0 (R-2.5) (17 years) |
License | GPL (>= 2) |
Depends | R (>= 2.8.0), Biobase(>= 2.1.0), affy(>= 1.20.0), affyPLM(>= 1.18.0), preprocessCore(>= 1.4.0) |
Imports | |
System Requirements | |
URL |
See More
Suggests | affydata |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | |
Windows Binary | RefPlus_1.72.0.zip |
macOS Binary (x86_64) | RefPlus_1.72.0.tgz |
macOS Binary (arm64) | RefPlus_1.72.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/RefPlus |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/RefPlus |
Bioc Package Browser | https://code.bioconductor.org/browse/RefPlus/ |
Package Short Url | https://bioconductor.org/packages/RefPlus/ |
Package Downloads Report | Download Stats |