PhyloProfileData

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see PhyloProfileData.

Data package for phylogenetic profile analysis using PhyloProfile tool


Bioconductor version: 3.12

Two experimental datasets to illustrate running and analysing phylogenetic profiles with PhyloProfile package.

Author: Ingo Ebersberger, Arpit Jain, Hannah Mülbaier, Vinh Tran

Maintainer: Vinh Tran <tran at bio.uni-frankfurt.de>

Citation (from within R, enter citation("PhyloProfileData")):

Installation

To install this package, start R (version "4.0") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("PhyloProfileData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PhyloProfileData")
PhyloProfileData HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews ExperimentData, ExperimentHub, ReproducibleResearch
Version 1.4.0
License MIT + file LICENSE
Depends R (>= 3.6.0)
Imports ExperimentHub, Biostrings
System Requirements
URL https://github.com/BIONF/PhyloProfileData
Bug Reports https://github.com/trvinh/PhyloProfileData/issues
See More
Suggests knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package PhyloProfileData_1.4.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/PhyloProfileData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/PhyloProfileData
Package Short Url https://bioconductor.org/packages/PhyloProfileData/
Package Downloads Report Download Stats