flowUtils

This package is for version 3.12 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see flowUtils.

Utilities for flow cytometry


Bioconductor version: 3.12

Provides utilities for flow cytometry data.

Author: J. Spidlen., N. Gopalakrishnan, F. Hahne, B. Ellis, R. Gentleman, M. Dalphin, N. Le Meur, B. Purcell, W. Jiang

Maintainer: Josef Spidlen <jspidlen at gmail.com>

Citation (from within R, enter citation("flowUtils")):

Installation

To install this package, start R (version "4.0") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowUtils")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowUtils")
Gating-ML support in R PDF R Script
Reference Manual PDF

Details

biocViews CellBasedAssays, DecisionTree, FlowCytometry, ImmunoOncology, Infrastructure, Software
Version 1.54.0
In Bioconductor since BioC 2.2 (R-2.7) (16 years)
License Artistic-2.0
Depends R (>= 2.2.0)
Imports Biobase, graph, methods, stats, utils, corpcor, RUnit, XML, flowCore(>= 1.32.0)
System Requirements
URL https://github.com/jspidlen/flowUtils
Bug Reports https://github.com/jspidlen/flowUtils/issues
See More
Suggests gatingMLData
Linking To
Enhances
Depends On Me
Imports Me CytoTree, flowSpy
Suggests Me gatingMLData
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowUtils_1.54.0.tar.gz
Windows Binary flowUtils_1.54.0.zip
macOS 10.13 (High Sierra) flowUtils_1.54.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowUtils
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowUtils
Bioc Package Browser https://code.bioconductor.org/browse/flowUtils/
Package Short Url https://bioconductor.org/packages/flowUtils/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.12 Source Archive