\name{quadratic-class} \docType{class} \alias{quadratic-class} \alias{quadratic} \alias{eval,quadratic,missing,missing-method} \title{Class "quadratic" } \description{ Quadratic transform class defines a transformation defined by the function \deqn{f(parameter,a)=a*parameter^2} } \section{Objects from the Class}{ Objects can be created by calls to the constructor \code{quadratic(parameters,a,transformationId)} } \section{Slots}{ \describe{ \item{\code{.Data}:}{Object of class \code{"function"} ~~ } \item{\code{a}:}{Object of class \code{"numeric"}-non zero multiplicative constant} \item{\code{parameters}:}{Object of class \code{"transformation"}-flow parameter to be transformed} \item{\code{transformationId}:}{Object of class \code{"character"}-unique ID to reference the transformation} } } \section{Extends}{ Class \code{"\linkS4class{singleParameterTransform}"}, directly. Class \code{"\linkS4class{transform}"}, by class "singleParameterTransform", distance 2. Class \code{"\linkS4class{transformation}"}, by class "singleParameterTransform", distance 3. Class \code{"\linkS4class{characterOrTransformation}"}, by class "singleParameterTransform", distance 4. } \section{Methods}{ No methods defined with class "quadratic" in the signature. } \references{Gating-ML Candidate Recommendation for Gating Description in Flow Cytometry V 1.5 } \author{Gopalakrishnan N, F.Hahne} \note{ The quadratic transformation object can be evaluated using the eval method by passing the data frame as an argument.The transformed parameters are returned as a column vector. (See example below) } \seealso{ dg1polynomial,ratio,squareroot } \examples{ dat <- read.FCS(system.file("extdata","0877408774.B08", package="flowCore")) quad1<-quadratic(parameters="FSC-H",a=2,transformationId="quad1") transOut<-eval(quad1)(exprs(dat)) } \keyword{classes}