\name{plot-methods} \docType{methods} \alias{plot} \alias{plot-methods} \alias{plot,INI_Calls,missing-method} \title{Visualizes the distribution of informative and non-informatives genes} \description{ This function visualizes the distribution of informative and non-informative genes of a given instance of \code{\link[farms]{INI_Calls-class}}. } \section{Methods}{ \describe{ \item{\code{signature(x = "INI_Calls", y = "missing")}}{An instance of \code{\link[farms]{INI_Calls-class}}. } }} \usage{ \S4method{plot}{INI_Calls,missing}(x) } \arguments{ \item{x}{An instance of \code{\link[farms]{INI_Calls-class}}.} } \value{\code{\link[Biobase]{exprSet-class}}} \seealso{\code{\link{expFarms}}, \code{\link{qFarms}},\code{\link{lFarms}},\code{\link{INIcalls}},\code{\link{summary}}} \examples{ data(testAffyBatch) eset <- expFarms(testAffyBatch, bgcorrect.method = "rma", pmcorrect.method = "pmonly", normalize.method = "constant") INIs <- INIcalls(eset) # apply I/NI calls summary(INIs) plot(INIs) # draws a density plot of I/NI-calls I_data <- getI_Eset(INIs) # affybatch containing only informative probe sets NI_data <- getNI_Eset(INIs) # affybatch containing only non-informative probe sets I_probes <- getI_ProbeSets(INIs) # vector containing only informative probe sets names NI_probes <- getNI_ProbeSets(INIs) # vector containing only non-informative probe sets names } \keyword{manip} \keyword{methods}