\name{factCount} \docType{data} \alias{factCount} \title{Simulated data for testing the baySeq package methods; simulated counts from a factorial design differential expression analysis} \description{This data set is a matrix of simulated counts from a simple pairwise expression analysis. It is simulated according to a negative binomial distribution with varying parameters for each row. The first hundred rows of the data are truly differentially expressed between the first four samples and the second four samples. The second hundred rows of the data are truly differentially expressed between samples 1,2,5,6 and samples 3,4,7,8. } \usage{factCount} \format{A matrix of which each of the eight columns represents a sample, and each row some discrete data (acquired by sequencing).} \source{Simulation.} \seealso{\code{\link{factlibsizes}}} \references{Hardcastle T.J., and Kelly, K. baySeq: Empirical Bayesian Methods For Identifying Differential Expression In Sequence Count Data. BMC Bioinformatics (2010)} \keyword{datasets}