\name{MItimeIcE2} \Rdversion{1.1} \alias{MItimeIcE2} %- Also NEED an '\alias' for EACH other topic documented here. \title{ MItimeIcE2 } \description{ Compute the d-delayed Mutual information all over the whole set of genes } \usage{ MItimeIcE2(z, N, delta, norm, threshold, ksd, IcE) } %- maybe also 'usage' for other objects documented here. \arguments{ \item{z}{ z is the data matrix} \item{N}{ N is respectively the number of bins in percentile normalization or in rank normalization } \item{delta}{ delta is the maximum time delay allowed to infer connections } \item{norm}{ if you want column percentile normalization put norm == 1; if you want Rank normalization put norm == 2; } \item{threshold}{ the Influence threshold. if you have a threshold and a SD put them here in this format: c(thresh,SD) if you don't have threshold put 0 in thresh; } \item{ksd}{ ksd is the standard deviation multiplier; } \item{IcE}{ the IcE value } } % Add one or more standard keywords, see file 'KEYWORDS' in the % R documentation directory.