\name{stmFSC} \Rdversion{1.1} \alias{stmFSC} \docType{data} \title{ Flow cytometry data to test SamSPECTRAL algorithm.} \description{ This FCS file is used as demo data to illustrate SamSPECTRAL capabilities in identifying cell populations.} \usage{data(stm)} \format{ The is an FCS file.} %\details{ %% ~~ If necessary, more details than the __description__ above ~~ %} %\source{ %% ~~ reference to a publication or URL from which the data were obtained ~~ %} \references{ Zare, H. and Shooshtari, P. and Gupta, A. and Brinkman R.B: Data Reduction for Spectral Clustering to Analyse High Throughput Flow Cytometry Data. BMC Bioinformatics, 2010, 11:403.} \examples{ data(stm) # Read data files and transform them using log transform data.points <- stmFSC@exprs dimensions <- c(3,4,7) full <- log10(data.points[,dimensions]) plot(full, pch='.') } \keyword{datasets}