\name{internal} \alias{internal} \alias{moduleNetwork.aux} \alias{connectModules} \alias{fitBUM} \alias{dbum} \alias{rbum} \alias{qbum} \alias{pbum} \alias{getComponent} \alias{inv.logit} \alias{logit} \alias{bum.negLogLik} \alias{bum.mle} \alias{bum.EM} \alias{qqbum} \alias{bum.histogram} \alias{bum.dalt} \alias{bum.palt} \alias{bum.qalt} \alias{bum.ralt} \alias{nem.featureselection} \alias{createBN} \alias{which.is.max} \alias{fit.BN} \alias{exhaustive_BN} \alias{optimizemarginal} \alias{ingreed_BN} \alias{optimizecoregraph} \alias{graychange} \alias{is.dag} \alias{optimizemarginal.nuInf} \alias{parameters_continuous_Bayesian} \alias{parameters_continuous_ML} \alias{parameters_discrete_Bayesian} \alias{parameters_discrete_ML} \alias{score_continuous_Bayesian} \alias{score_continuous_ML} \alias{score_discrete_Bayesian} \alias{score_discrete_ML} \alias{FULLmLL} \alias{mLL} \alias{score} \alias{moduleNetwork} \alias{enumerate.models2} \alias{nem.greedy} \alias{nem.greedyMAP} \alias{pairwise.posterior} \alias{triples.posterior} \alias{nem.BN} \alias{data.likelihood} \alias{effect.likelihood} \alias{encode.interventions} \alias{erase.cycles} \alias{learn} \alias{learn.conditionals} \alias{PhiDistr} \alias{sample.effect.likelihood} \alias{sample.likelihood} \alias{score_BN} \alias{score.network} \alias{sim.interventions} %- Also NEED an '\alias' for EACH other topic documented here. \title{ internal functions } \description{ internal functions: do not call these functions directly. } \usage{ various } %- maybe also 'usage' for other objects documented here. \arguments{ various } %\details{ %} \value{ various } \author{ Holger Froehlich } \keyword{models}