\name{boxplot.dev} \alias{boxplot.dev} \title{Box Plots for Device} \description{ Produce box-and-whisker plot(s) of the samples for the selected device. } \usage{ boxplot.dev(x, which = "", size = 0, transfo = log2, range = 0, names = "namepart", mar = c(10, 5, 4, 1), las = 2, dev = "screen", outfile = "BoxPlot", w = 800, h = 540, ...) } \arguments{ \item{x}{object of class \code{\link{DataTreeSet}} or \code{\link{ExprTreeSet}}.} \item{which}{type of probes to be used, for details see \code{\link{validData}}.} \item{size}{length of sequence to be generated as subset.} \item{transfo}{a valid function to transform the data, usually \code{log2}, or 0.} \item{range}{determines how far the plot whiskers extend out from the box.} \item{names}{optional vector of sample names.} \item{mar}{plot margin.} \item{las}{style of axis labels.} \item{dev}{graphics device to plot to, i.e. one of \dQuote{screen}, \dQuote{jpeg},\dQuote{png}, \dQuote{pdf} or \dQuote{ps}.} \item{outfile}{the name of the output file.} \item{w}{the width of the device in pixels.} \item{h}{the height of the device in pixels.} \item{\dots}{optional arguments to be passed to \code{boxplot}.} } \details{ Produces a boxplot for slot \code{data} for an object of class \code{\link{DataTreeSet}} or \code{\link{ExprTreeSet}} for the selected graphics device. } \author{Christian Stratowa} \note{ For a \code{\link{DataTreeSet}} object, data must first be attached using method \code{\link{attachInten}}. } \seealso{\code{\link{boxplot}}} \keyword{device}