\name{SPIKE_IN95} \alias{SPIKE_IN95} \docType{data} \title{set of spike-in genes contained in the HGU95 dataset} \description{This dataset contains a set of gene names contained in the HGU95 dataset} \usage{data(SPIKE_IN95)} \format{The set of spike-in gene names contained in the HGU dataset} \source{This data is experimental data extracted from the publicly available HGU dataset} \references{ E. Carlon and T. Heim, Physica A 362, 433 (2006). } \seealso{ \code{\link{Ivsc}}, \code{\link{IvsDG}}, \code{\link{collapse}}, \code{\link{SPIKE_IN}}, \code{\link{hgu}} , \code{\link{SPIKE_INA}}, \code{\link{SPIKE_INB}}, \code{\link{SPIKE_INH}} } \examples{ ## you can first check if the data matches the predicted hybridisation value according to the langmuir ## value, from the intensity versus the concentration value Ivsc(SPIKE_IN95[1]) ## you can then plot the value of the Intensity of the probe with the predicted value of the hybridisation ## according to the Delta G, value IvsDG(SPIKE_IN95[4],128) ## The collapse function will finally plot all the values of the probe set according to ## the langmuir absorption theory collapse(SPIKE_IN95[2]) ## By comparing the matched value and the mismatches, you will be able to identify errors which ## could have done while sampling the data, or if the error happens repeatedly this will show errors ## which will have happened while sequencing old data. } \keyword{datasets}